3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAAAUCC*GAACUG
Length
14 nucleotides
Bulged bases
7OIG|1|2|U|632
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OIG_141 not in the Motif Atlas
Homologous match to IL_5J7L_030
Geometric discrepancy: 0.0786
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

7OIG|1|2|U|605
7OIG|1|2|G|606
7OIG|1|2|A|607
7OIG|1|2|A|608
7OIG|1|2|A|609
7OIG|1|2|U|610
7OIG|1|2|C|611
7OIG|1|2|C|612
*
7OIG|1|2|G|628
7OIG|1|2|A|629
7OIG|1|2|A|630
7OIG|1|2|C|631
7OIG|1|2|U|632
7OIG|1|2|G|633

Current chains

Chain 2
16S rRNA

Nearby chains

Chain h
30S ribosomal protein S4
Chain l
30S ribosomal protein S8
Chain t
30S ribosomal protein S16
Chain u
30S ribosomal protein S17

Coloring options:


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