3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGUUC*GGUAG
Length
10 nucleotides
Bulged bases
7OII|1|1|U|2689, 7OII|1|1|U|2690
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OII_103 not in the Motif Atlas
Homologous match to IL_5J7L_348
Geometric discrepancy: 0.0775
The information below is about IL_5J7L_348
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_23774.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
11

Unit IDs

7OII|1|1|U|2687
7OII|1|1|G|2688
7OII|1|1|U|2689
7OII|1|1|U|2690
7OII|1|1|C|2691
*
7OII|1|1|G|2718
7OII|1|1|G|2719
7OII|1|1|U|2720
7OII|1|1|A|2721
7OII|1|1|G|2722

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain M
50S ribosomal protein L17
Chain O
50S ribosomal protein L19

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