IL_7OII_165

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

7OII|1|2|A|1257, 7OII|1|2|A|1280, 7OII|1|2|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OII_165 not in the Motif Atlas

Homologous match to IL_5J7L_055

Geometric discrepancy: 0.1258

The information below is about IL_5J7L_055

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

7OII|1|2|G|1255
7OII|1|2|A|1256
7OII|1|2|A|1257
7OII|1|2|G|1258
*
7OII|1|2|C|1277
7OII|1|2|G|1278
7OII|1|2|G|1279
7OII|1|2|A|1280
7OII|1|2|C|1281
7OII|1|2|C|1282

Current chains

Chain 2

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S3

Chain n

30S ribosomal protein S10

Chain r

30S ribosomal protein S14