IL_7OLC_267
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUAG*CUAUU
- Length
- 9 nucleotides
- Bulged bases
- 7OLC|1|1|U|2464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_267 not in the Motif Atlas
- Geometric match to IL_1JID_002
- Geometric discrepancy: 0.1966
- The information below is about IL_1JID_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
7OLC|1|1|A|2408
7OLC|1|1|U|2409
7OLC|1|1|A|2410
7OLC|1|1|G|2411
*
7OLC|1|1|C|2461
7OLC|1|1|U|2462
7OLC|1|1|A|2463
7OLC|1|1|U|2464
7OLC|1|1|U|2465
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain Li
- 60S ribosomal protein L36
Coloring options: