IL_7OLC_293
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 7OLC|1|2|C|1271, 7OLC|1|2|U|1428, 7OLC|1|2|G|1431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_293 not in the Motif Atlas
- Homologous match to IL_8P9A_439
- Geometric discrepancy: 0.1141
- The information below is about IL_8P9A_439
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99893.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OLC|1|2|U|1269
7OLC|1|2|G|1270
7OLC|1|2|C|1271
7OLC|1|2|A|1272
7OLC|1|2|U|1273
7OLC|1|2|G|1274
7OLC|1|2|G|1275
*
7OLC|1|2|U|1426
7OLC|1|2|C|1427
7OLC|1|2|U|1428
7OLC|1|2|G|1429
7OLC|1|2|U|1430
7OLC|1|2|G|1431
7OLC|1|2|A|1432
7OLC|1|2|U|1433
7OLC|1|2|G|1434
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SD
- 40S ribosomal protein S3-like protein
- Chain SK
- 40S ribosomal protein s10-like protein
- Chain SU
- 40S ribosomal protein S20-like protein
- Chain Sd
- uS14
- Chain Sf
- 40S ribosomal protein S27a-like protein
Coloring options: