IL_7OLD_055
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 7OLD|1|1|U|1174, 7OLD|1|1|C|1175, 7OLD|1|1|C|1299, 7OLD|1|1|A|1301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_055 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.1335
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7OLD|1|1|C|1170
7OLD|1|1|U|1171
7OLD|1|1|C|1172
7OLD|1|1|A|1173
7OLD|1|1|U|1174
7OLD|1|1|C|1175
7OLD|1|1|A|1176
7OLD|1|1|G|1177
*
7OLD|1|1|C|1297
7OLD|1|1|U|1298
7OLD|1|1|C|1299
7OLD|1|1|A|1300
7OLD|1|1|A|1301
7OLD|1|1|G|1302
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LH
- 60S ribosomal protein l9-like protein
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain LS
- 60S ribosomal protein L20
- Chain Lm
- Ubiquitin
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