IL_7OLD_111
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_111 not in the Motif Atlas
- Homologous match to IL_5TBW_100
- Geometric discrepancy: 0.1015
- The information below is about IL_5TBW_100
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7OLD|1|1|U|2677
7OLD|1|1|U|2678
7OLD|1|1|G|2679
7OLD|1|1|A|2680
*
7OLD|1|1|U|2694
7OLD|1|1|A|2695
7OLD|1|1|C|2696
7OLD|1|1|A|2697
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein l5-like protein
- Chain LQ
- Ribosomal protein L18-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
- Chain Lb
- 60S ribosomal protein L29
- Chain Lo
- 60S ribosomal protein L44-like protein
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