IL_7OSA_003
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 7OSA|1|18S|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_003 not in the Motif Atlas
- Homologous match to IL_8C3A_394
- Geometric discrepancy: 0.1254
- The information below is about IL_8C3A_394
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_30569.1
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|18S|U|37
7OSA|1|18S|C|38
7OSA|1|18S|A|39
7OSA|1|18S|A|40
7OSA|1|18S|A|41
*
7OSA|1|18S|U|466
7OSA|1|18S|G|467
7OSA|1|18S|A|468
7OSA|1|18S|C|469
7OSA|1|18S|A|470
7OSA|1|18S|A|471
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eEF2
- Elongation factor 2
- Chain eS24
- 40S ribosomal protein S24
- Chain eS4
- 40S ribosomal protein S4
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
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