IL_7OSA_029
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 7OSA|1|18S|A|579, 7OSA|1|18S|U|581, 7OSA|1|18S|U|582
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_029 not in the Motif Atlas
- Homologous match to IL_8P9A_404
- Geometric discrepancy: 0.194
- The information below is about IL_8P9A_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OSA|1|18S|G|562
7OSA|1|18S|U|563
7OSA|1|18S|G|564
7OSA|1|18S|C|565
7OSA|1|18S|C|566
7OSA|1|18S|A|567
7OSA|1|18S|G|568
*
7OSA|1|18S|C|575
7OSA|1|18S|G|576
7OSA|1|18S|G|577
7OSA|1|18S|U|578
7OSA|1|18S|A|579
7OSA|1|18S|A|580
7OSA|1|18S|U|581
7OSA|1|18S|U|582
7OSA|1|18S|C|583
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eEF2
- Elongation factor 2
- Chain eS30
- 40S ribosomal protein S30
- Chain uS12
- 40S ribosomal protein S23
- Chain uS3
- BJ4_G0045400.mRNA.1.CDS.1
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