IL_7OSA_049

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAU*GCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_049 not in the Motif Atlas

Homologous match to IL_8C3A_444

Geometric discrepancy: 0.1152

The information below is about IL_8C3A_444

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_54697.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

51

Unit IDs

7OSA|1|18S|G|1041
7OSA|1|18S|G|1042
7OSA|1|18S|A|1043
7OSA|1|18S|U|1044
*
7OSA|1|18S|G|1074
7OSA|1|18S|C|1075
7OSA|1|18S|A|1076
7OSA|1|18S|C|1077

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS1

40S ribosomal protein S1

Chain eS26

40S ribosomal protein S26

Chain uS15

40S ribosomal protein S13

Chain uS2

40S ribosomal protein S0