IL_7OSA_063
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGG*CGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_063 not in the Motif Atlas
- Homologous match to IL_8C3A_459
- Geometric discrepancy: 0.1167
- The information below is about IL_8C3A_459
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_63702.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 13
Unit IDs
7OSA|1|18S|U|1290
7OSA|1|18S|G|1291
7OSA|1|18S|G|1292
*
7OSA|1|18S|C|1323
7OSA|1|18S|G|1324
7OSA|1|18S|A|1325
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS17
- BJ4_G0020710.mRNA.1.CDS.1
- Chain uS2
- 40S ribosomal protein S0
- Chain uS3
- BJ4_G0045400.mRNA.1.CDS.1
- Chain uS5
- 40S ribosomal protein S2
Coloring options: