IL_7OSA_064

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_064 not in the Motif Atlas

Homologous match to IL_8C3A_460

Geometric discrepancy: 0.1268

The information below is about IL_8C3A_460

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_58310.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

24

Unit IDs

7OSA|1|18S|C|1306
7OSA|1|18S|U|1307
7OSA|1|18S|G|1308
*
7OSA|1|18S|C|1317
7OSA|1|18S|G|1318

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS17

BJ4_G0020710.mRNA.1.CDS.1

Chain eS26

40S ribosomal protein S26