IL_7OSA_069
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCCAGCGA*UUGUGAAAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_069 not in the Motif Atlas
- Homologous match to IL_8P9A_448
- Geometric discrepancy: 0.0987
- The information below is about IL_8P9A_448
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91698.1
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|18S|G|1480
7OSA|1|18S|C|1481
7OSA|1|18S|C|1482
7OSA|1|18S|A|1483
7OSA|1|18S|G|1484
7OSA|1|18S|C|1485
7OSA|1|18S|G|1486
7OSA|1|18S|A|1487
*
7OSA|1|18S|U|1519
7OSA|1|18S|U|1520
7OSA|1|18S|G|1521
7OSA|1|18S|U|1522
7OSA|1|18S|G|1523
7OSA|1|18S|A|1524
7OSA|1|18S|A|1525
7OSA|1|18S|A|1526
7OSA|1|18S|C|1527
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS19
- 40S ribosomal protein S19-A
- Chain eS25
- 40S ribosomal protein S25
- Chain uS10
- 40S ribosomal protein S20
- Chain uS14
- HLJ1_G0030400.mRNA.1.CDS.1
- Chain uS3
- BJ4_G0045400.mRNA.1.CDS.1
- Chain uS7
- Rps5p
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: