IL_7OSA_071

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_071 not in the Motif Atlas

Homologous match to IL_8P9A_450

Geometric discrepancy: 0.1337

The information below is about IL_8P9A_450

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OSA|1|18S|C|1495
7OSA|1|18S|U|1496
7OSA|1|18S|U|1497
7OSA|1|18S|G|1498
*
7OSA|1|18S|C|1509
7OSA|1|18S|U|1510
7OSA|1|18S|U|1511
7OSA|1|18S|G|1512

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS19

40S ribosomal protein S19-A