3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CAAC*GUG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_093 not in the Motif Atlas
Geometric match to IL_5TBW_064
Geometric discrepancy: 0.2437
The information below is about IL_5TBW_064
Detailed Annotation
Other IL
Broad Annotation
Other IL
Motif group
IL_15698.1
Basepair signature
cWW-tSH-cSH-cWW
Number of instances in this motif group
9

Unit IDs

7OSA|1|25S|C|163
7OSA|1|25S|A|164
7OSA|1|25S|A|165
7OSA|1|25S|C|166
*
7OSA|1|25S|G|256
7OSA|1|25S|U|257
7OSA|1|25S|G|258

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL13
60S ribosomal protein L13
Chain uL29
BJ4_G0044250.mRNA.1.CDS.1

Coloring options:


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