IL_7OSA_099
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_099 not in the Motif Atlas
- Homologous match to IL_8P9A_244
- Geometric discrepancy: 0.073
- The information below is about IL_8P9A_244
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OSA|1|25S|G|404
7OSA|1|25S|U|405
7OSA|1|25S|G|406
7OSA|1|25S|A|407
7OSA|1|25S|A|408
7OSA|1|25S|A|409
7OSA|1|25S|U|410
*
7OSA|1|58S|A|13
7OSA|1|58S|C|14
7OSA|1|58S|G|15
7OSA|1|58S|G|16
7OSA|1|58S|A|17
7OSA|1|58S|U|18
7OSA|1|58S|C|19
Current chains
- Chain 25S
- 25S rRNA
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain eL32
- HN1_G0013350.mRNA.1.CDS.1
- Chain uL22
- BJ4_G0005750.mRNA.1.CDS.1
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: