3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
AUUA*UUCU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_126 not in the Motif Atlas
Homologous match to IL_8C3A_481
Geometric discrepancy: 0.1022
The information below is about IL_8C3A_481
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_36174.1
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
15

Unit IDs

7OSA|1|25S|A|1006
7OSA|1|25S|U|1007
7OSA|1|25S|U|1008
7OSA|1|25S|A|1009
*
7OSA|1|25S|U|1041
7OSA|1|25S|U|1042
7OSA|1|25S|C|1043
7OSA|1|25S|U|1044

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain uL16
60S ribosomal protein L10
Chain uL18
60S ribosomal protein L5

Coloring options:


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