IL_7OSA_161

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

7OSA|1|25S|U|1931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_161 not in the Motif Atlas

Homologous match to IL_8C3A_084

Geometric discrepancy: 0.0885

The information below is about IL_8C3A_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7OSA|1|25S|C|1918
7OSA|1|25S|G|1919
7OSA|1|25S|U|1920
7OSA|1|25S|A|1921
7OSA|1|25S|A|1922
7OSA|1|25S|C|1923
*
7OSA|1|25S|G|1928
7OSA|1|25S|G|1929
7OSA|1|25S|A|1930
7OSA|1|25S|U|1931
7OSA|1|25S|A|1932
7OSA|1|25S|A|1933
7OSA|1|25S|G|1934

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 18S

Small subunit ribosomal RNA; SSU rRNA

Chain eL41

eL41

Chain eL43

60S ribosomal protein L43-A