IL_7OSA_171
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCAAAGU*AACCAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_171 not in the Motif Atlas
- Homologous match to IL_8P9A_316
- Geometric discrepancy: 0.1085
- The information below is about IL_8P9A_316
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65359.1
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OSA|1|25S|U|2211
7OSA|1|25S|C|2212
7OSA|1|25S|A|2213
7OSA|1|25S|A|2214
7OSA|1|25S|A|2215
7OSA|1|25S|G|2216
7OSA|1|25S|U|2217
*
7OSA|1|25S|A|2228
7OSA|1|25S|A|2229
7OSA|1|25S|C|2230
7OSA|1|25S|C|2231
7OSA|1|25S|A|2232
7OSA|1|25S|A|2233
7OSA|1|25S|G|2234
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eL36
- 60S ribosomal protein L36-A
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
Coloring options: