IL_7OSA_179

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAU*AUAG

Length

7 nucleotides

Bulged bases

7OSA|1|25S|A|2502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_179 not in the Motif Atlas

Geometric match to IL_7A0S_078

Geometric discrepancy: 0.2718

The information below is about IL_7A0S_078

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

78

Unit IDs

7OSA|1|25S|C|2444
7OSA|1|25S|A|2445
7OSA|1|25S|U|2446
*
7OSA|1|25S|A|2500
7OSA|1|25S|U|2501
7OSA|1|25S|A|2502
7OSA|1|25S|G|2503

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL36

60S ribosomal protein L36-A