3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUC*GUGAG
Length
8 nucleotides
Bulged bases
7OSA|1|25S|G|2945, 7OSA|1|25S|A|2946
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_191 not in the Motif Atlas
Homologous match to IL_8P9A_335
Geometric discrepancy: 0.081
The information below is about IL_8P9A_335
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_07785.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
33

Unit IDs

7OSA|1|25S|C|2879
7OSA|1|25S|U|2880
7OSA|1|25S|C|2881
*
7OSA|1|25S|G|2943
7OSA|1|25S|U|2944
7OSA|1|25S|G|2945
7OSA|1|25S|A|2946
7OSA|1|25S|G|2947

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain uL14
60S ribosomal protein L23-B
Chain uL3
60S ribosomal protein L3

Coloring options:


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