IL_7OSA_191

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

7OSA|1|25S|G|2945, 7OSA|1|25S|A|2946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_191 not in the Motif Atlas

Homologous match to IL_8P9A_335

Geometric discrepancy: 0.081

The information below is about IL_8P9A_335

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

7OSA|1|25S|C|2879
7OSA|1|25S|U|2880
7OSA|1|25S|C|2881
*
7OSA|1|25S|G|2943
7OSA|1|25S|U|2944
7OSA|1|25S|G|2945
7OSA|1|25S|A|2946
7OSA|1|25S|G|2947

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain uL14

60S ribosomal protein L23-B

Chain uL3

60S ribosomal protein L3