IL_7OSA_201

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUUUG*CGAAG

Length

11 nucleotides

Bulged bases

7OSA|1|25S|U|3056, 7OSA|1|25S|U|3058

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_201 not in the Motif Atlas

Homologous match to IL_8P9A_346

Geometric discrepancy: 0.074

The information below is about IL_8P9A_346

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_21001.1

Basepair signature

cWW-L-R-tHW-L-cWW

Number of instances in this motif group

3

Unit IDs

7OSA|1|25S|U|3054
7OSA|1|25S|U|3055
7OSA|1|25S|U|3056
7OSA|1|25S|U|3057
7OSA|1|25S|U|3058
7OSA|1|25S|G|3059
*
7OSA|1|25S|C|3084
7OSA|1|25S|G|3085
7OSA|1|25S|A|3086
7OSA|1|25S|A|3087
7OSA|1|25S|G|3088

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL24

60S ribosomal protein L24-A

Chain eL31

BJ4_G0008090.mRNA.1.CDS.1

Chain uL3

60S ribosomal protein L3