IL_7OSA_205

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUAU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_205 not in the Motif Atlas

Geometric match to IL_7A0S_040

Geometric discrepancy: 0.2699

The information below is about IL_7A0S_040

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7OSA|1|25S|A|3168
7OSA|1|25S|U|3169
7OSA|1|25S|A|3170
7OSA|1|25S|U|3171
*
7OSA|1|25S|A|3279
7OSA|1|25S|U|3280
7OSA|1|25S|U|3281
7OSA|1|25S|U|3282

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL33

BJ4_G0025510.mRNA.1.CDS.1