IL_7OSA_226
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUCCC*GAUCA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_226 not in the Motif Atlas
- Homologous match to IL_8C3A_147
- Geometric discrepancy: 0.1177
- The information below is about IL_8C3A_147
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.10
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
7OSA|1|AB|U|32
7OSA|1|AB|U|33
7OSA|1|AB|C|34
7OSA|1|AB|C|35
7OSA|1|AB|C|36
*
7OSA|1|AB|G|41
7OSA|1|AB|A|42
7OSA|1|AB|U|43
7OSA|1|AB|C|44
7OSA|1|AB|A|45
Current chains
- Chain AB
- 5S
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain uL18
- 60S ribosomal protein L5
- Chain uL5
- BJ4_G0027750.mRNA.1.CDS.1
Coloring options: