IL_7OSA_251

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

ACACAA*UUGCGU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_251 not in the Motif Atlas

Geometric match to IL_5TBW_476

Geometric discrepancy: 0.2504

The information below is about IL_5TBW_476

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31007.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

5

Unit IDs

7OSA|1|25S|A|3163
7OSA|1|25S|C|3164
7OSA|1|25S|A|3165
7OSA|1|25S|C|3166
7OSA|1|25S|A|3167
7OSA|1|25S|A|3168
*
7OSA|1|25S|U|3282
7OSA|1|25S|U|3283
7OSA|1|25S|G|3284
7OSA|1|25S|C|3285
7OSA|1|25S|G|3286
7OSA|1|25S|U|3287

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL33

BJ4_G0025510.mRNA.1.CDS.1