3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CAA*UG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_259 not in the Motif Atlas
Homologous match to IL_8P9A_238
Geometric discrepancy: 0.2166
The information below is about IL_8P9A_238
Detailed Annotation
Single stack bend
Broad Annotation
No text annotation
Motif group
IL_90729.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

7OSA|1|25S|C|163
7OSA|1|25S|A|164
7OSA|1|25S|A|165
*
7OSA|1|25S|U|257
7OSA|1|25S|G|258

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL13
60S ribosomal protein L13
Chain uL29
BJ4_G0044250.mRNA.1.CDS.1

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1687 s