IL_7OSM_007
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 7OSM|1|18S|U|66, 7OSM|1|18S|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_007 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.1303
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|18S|U|64
7OSM|1|18S|A|65
7OSM|1|18S|U|66
7OSM|1|18S|A|67
7OSM|1|18S|A|68
7OSM|1|18S|G|69
*
7OSM|1|18S|U|82
7OSM|1|18S|G|83
7OSM|1|18S|A|84
7OSM|1|18S|A|85
7OSM|1|18S|A|86
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS24
- 40S ribosomal protein S24
- Chain eS6
- 40S ribosomal protein S6
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