IL_7OSM_008
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUUA*UUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_008 not in the Motif Atlas
- Homologous match to IL_4V88_391
- Geometric discrepancy: 0.1153
- The information below is about IL_4V88_391
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7OSM|1|18S|G|109
7OSM|1|18S|U|110
7OSM|1|18S|U|111
7OSM|1|18S|A|112
*
7OSM|1|18S|U|302
7OSM|1|18S|U|303
7OSM|1|18S|U|304
7OSM|1|18S|C|305
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS4
- 40S ribosomal protein S4
- Chain eS8
- 40S ribosomal protein S8
- Chain uS17
- 40S ribosomal protein S11-B
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