3D structure

PDB id
7OSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CAUG*UGG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSM_016 not in the Motif Atlas
Homologous match to IL_4V88_400
Geometric discrepancy: 0.2673
The information below is about IL_4V88_400
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_47298.1
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
3

Unit IDs

7OSM|1|18S|C|270
7OSM|1|18S|A|271
7OSM|1|18S|U|272
7OSM|1|18S|G|273
*
7OSM|1|18S|U|283
7OSM|1|18S|G|284
7OSM|1|18S|G|285

Current chains

Chain 18S
18S rRNA

Nearby chains

Chain eS6
40S ribosomal protein S6

Coloring options:


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