IL_7OSM_019
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 7OSM|1|18S|U|380
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_019 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.0949
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|18S|G|363
7OSM|1|18S|G|364
7OSM|1|18S|G|365
*
7OSM|1|18S|C|376
7OSM|1|18S|G|377
7OSM|1|18S|A|378
7OSM|1|18S|U|379
7OSM|1|18S|U|380
7OSM|1|18S|C|381
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS4
- 40S ribosomal protein S4
- Chain uS12
- 40S ribosomal protein S23
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
Coloring options: