IL_7OSM_026
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUA*UAAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_026 not in the Motif Atlas
- Geometric match to IL_4V88_411
- Geometric discrepancy: 0.1934
- The information below is about IL_4V88_411
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_46796.2
- Basepair signature
- cWW-tHS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OSM|1|18S|G|516
7OSM|1|18S|U|517
7OSM|1|18S|A|518
*
7OSM|1|18S|U|533
7OSM|1|18S|A|534
7OSM|1|18S|A|535
7OSM|1|18S|C|536
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS24
- 40S ribosomal protein S24
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
Coloring options: