IL_7OSM_048
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUG*CGU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_048 not in the Motif Atlas
- Geometric match to IL_6OL3_002
- Geometric discrepancy: 0.2305
- The information below is about IL_6OL3_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7OSM|1|18S|A|995
7OSM|1|18S|U|996
7OSM|1|18S|G|997
*
7OSM|1|18S|C|1007
7OSM|1|18S|G|1008
7OSM|1|18S|U|1009
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eS26
- 40S ribosomal protein S26
- Chain uL2
- 60S ribosomal protein L2-B
- Chain uS11
- 40S ribosomal protein S14-A
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