IL_7OSM_145
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAUAU*AUGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_145 not in the Motif Atlas
- Geometric match to IL_1J2B_001
- Geometric discrepancy: 0.3891
- The information below is about IL_1J2B_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7OSM|1|25S|G|1618
7OSM|1|25S|A|1619
7OSM|1|25S|U|1620
7OSM|1|25S|A|1621
7OSM|1|25S|U|1622
*
7OSM|1|25S|A|1823
7OSM|1|25S|U|1824
7OSM|1|25S|G|1825
7OSM|1|25S|C|1826
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL34
- 60S ribosomal protein L34-A
- Chain eL38
- BJ4_G0032190.mRNA.1.CDS.1
Coloring options: