IL_7OSM_152

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

7OSM|1|25S|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_152 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.0871

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7OSM|1|25S|U|1694
7OSM|1|25S|U|1695
7OSM|1|25S|A|1696
7OSM|1|25S|A|1697
7OSM|1|25S|C|1698
*
7OSM|1|25S|G|1747
7OSM|1|25S|G|1748
7OSM|1|25S|A|1749
7OSM|1|25S|A|1750
7OSM|1|25S|G|1751
7OSM|1|25S|A|1752

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL34

60S ribosomal protein L34-A

Chain eL38

BJ4_G0032190.mRNA.1.CDS.1