IL_7OSM_153

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAUCA*UCUUAUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_153 not in the Motif Atlas

Homologous match to IL_5TBW_072

Geometric discrepancy: 0.0946

The information below is about IL_5TBW_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39753.2

Basepair signature

cWW-L-R-tWH-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7OSM|1|25S|U|1702
7OSM|1|25S|U|1703
7OSM|1|25S|A|1704
7OSM|1|25S|U|1705
7OSM|1|25S|C|1706
7OSM|1|25S|A|1707
*
7OSM|1|25S|U|1737
7OSM|1|25S|C|1738
7OSM|1|25S|U|1739
7OSM|1|25S|U|1740
7OSM|1|25S|A|1741
7OSM|1|25S|U|1742
7OSM|1|25S|G|1743

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL34

60S ribosomal protein L34-A