IL_7OSM_165

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UG*UAAA

Length

6 nucleotides

Bulged bases

7OSM|1|25S|A|2242, 7OSM|1|25S|A|2243

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_165 not in the Motif Atlas

Homologous match to IL_8C3A_090

Geometric discrepancy: 0.0965

The information below is about IL_8C3A_090

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OSM|1|25S|U|2200
7OSM|1|25S|G|2201
*
7OSM|1|25S|U|2241
7OSM|1|25S|A|2242
7OSM|1|25S|A|2243
7OSM|1|25S|A|2244

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 18S

Small subunit ribosomal RNA; SSU rRNA

Chain uL2

60S ribosomal protein L2-B