IL_7OSM_176
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUGAAGC*GGGU
- Length
- 11 nucleotides
- Bulged bases
- 7OSM|1|25S|G|2522, 7OSM|1|25S|G|2585, 7OSM|1|25S|G|2586
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_176 not in the Motif Atlas
- Homologous match to IL_5TBW_096
- Geometric discrepancy: 0.1371
- The information below is about IL_5TBW_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74114.1
- Basepair signature
- cWW-cWS-cWW-L-R
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|25S|A|2520
7OSM|1|25S|U|2521
7OSM|1|25S|G|2522
7OSM|1|25S|A|2523
7OSM|1|25S|A|2524
7OSM|1|25S|G|2525
7OSM|1|25S|C|2526
*
7OSM|1|25S|G|2584
7OSM|1|25S|G|2585
7OSM|1|25S|G|2586
7OSM|1|25S|U|2587
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL8
- 60S ribosomal protein L8-A
- Chain uL2
- 60S ribosomal protein L2-B
- Chain uL23
- 60S ribosomal protein L25
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