IL_7OSM_203
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UACGAAUAAG*CGCUGAA
- Length
- 17 nucleotides
- Bulged bases
- 7OSM|1|25S|A|3180, 7OSM|1|25S|A|3186, 7OSM|1|25S|C|3206, 7OSM|1|25S|U|3207, 7OSM|1|25S|A|3209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSM_203 not in the Motif Atlas
- Geometric match to IL_5TBW_124
- Geometric discrepancy: 0.1055
- The information below is about IL_5TBW_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15174.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7OSM|1|25S|U|3179
7OSM|1|25S|A|3180
7OSM|1|25S|C|3181
7OSM|1|25S|G|3182
7OSM|1|25S|A|3183
7OSM|1|25S|A|3184
7OSM|1|25S|U|3185
7OSM|1|25S|A|3186
7OSM|1|25S|A|3187
7OSM|1|25S|G|3188
*
7OSM|1|25S|C|3204
7OSM|1|25S|G|3205
7OSM|1|25S|C|3206
7OSM|1|25S|U|3207
7OSM|1|25S|G|3208
7OSM|1|25S|A|3209
7OSM|1|25S|A|3210
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL14
- 60S ribosomal protein L14-A
- Chain eL20
- 60S ribosomal protein L20
- Chain eL33
- BJ4_G0025510.mRNA.1.CDS.1
- Chain eL6
- 60S ribosomal protein L6
- Chain uL13
- 60S ribosomal protein L16-A
- Chain uL6
- 60S ribosomal protein L9-A
Coloring options: