IL_7OSM_207

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_207 not in the Motif Atlas

Geometric match to IL_3R2D_002

Geometric discrepancy: 0.1839

The information below is about IL_3R2D_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OSM|1|25S|C|3235
7OSM|1|25S|U|3236
7OSM|1|25S|U|3237
7OSM|1|25S|G|3238
*
7OSM|1|25S|C|3249
7OSM|1|25S|U|3250
7OSM|1|25S|U|3251
7OSM|1|25S|G|3252

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain uL13

60S ribosomal protein L16-A