IL_7OSM_231

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_231 not in the Motif Atlas

Homologous match to IL_8C3A_001

Geometric discrepancy: 0.1484

The information below is about IL_8C3A_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|G|5
7OSM|1|25S|A|6
7OSM|1|25S|C|7
*
7OSM|1|58S|G|152
7OSM|1|58S|U|153
7OSM|1|58S|C|154

Current chains

Chain 25S

25S rRNA

Chain 58S

5.8S rRNA

Nearby chains

Chain eL15

60S ribosomal protein L15-A

Chain eL8

60S ribosomal protein L8-A

Chain uL23

60S ribosomal protein L25