IL_7OSM_246

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CACA*UGCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_246 not in the Motif Atlas

Geometric match to IL_7R9G_002

Geometric discrepancy: 0.2479

The information below is about IL_7R9G_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7OSM|1|25S|C|3164
7OSM|1|25S|A|3165
7OSM|1|25S|C|3166
7OSM|1|25S|A|3167
*
7OSM|1|25S|U|3283
7OSM|1|25S|G|3284
7OSM|1|25S|C|3285
7OSM|1|25S|G|3286

Current chains

Chain 25S

25S rRNA

Nearby chains