IL_7OSM_256

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUU*ACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSM_256 not in the Motif Atlas

Homologous match to IL_8CRE_404

Geometric discrepancy: 0.1675

The information below is about IL_8CRE_404

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7OSM|1|18S|A|206
7OSM|1|18S|U|207
7OSM|1|18S|U|208
*
7OSM|1|18S|A|257
7OSM|1|18S|C|258
7OSM|1|18S|U|259

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS4

40S ribosomal protein S4

Chain eS8

40S ribosomal protein S8