IL_7OW7_030

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCGG*CCG

Length

7 nucleotides

Bulged bases

7OW7|1|A|C|738

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_030 not in the Motif Atlas

Geometric match to IL_3MOJ_004

Geometric discrepancy: 0.3302

The information below is about IL_3MOJ_004

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_75501.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7OW7|1|A|C|737
7OW7|1|A|C|738
7OW7|1|A|G|739
7OW7|1|A|G|740
*
7OW7|1|A|C|924
7OW7|1|A|C|925
7OW7|1|A|G|926

Current chains

Chain A

28S rRNA

Nearby chains

Chain s

60S ribosomal protein L14