IL_7OW7_103

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCU*G(OMG)U

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_103 not in the Motif Atlas

Geometric match to IL_4KR9_001

Geometric discrepancy: 0.1397

The information below is about IL_4KR9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7OW7|1|A|G|3705
7OW7|1|A|C|3706
7OW7|1|A|U|3707
*
7OW7|1|A|G|3743
7OW7|1|A|OMG|3744
7OW7|1|A|U|3745

Current chains

Chain A

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L8