IL_7OW7_136

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

G(PSU)U*AAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_136 not in the Motif Atlas

Geometric match to IL_2ET8_001

Geometric discrepancy: 0.1603

The information below is about IL_2ET8_001

Detailed Annotation

Stack and bulge

Broad Annotation

Stack and bulge

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7OW7|1|A|G|4578
7OW7|1|A|PSU|4579
7OW7|1|A|U|4580
*
7OW7|1|A|A|4723
7OW7|1|A|A|4724
7OW7|1|A|C|4725

Current chains

Chain A

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L3 isoform a