IL_7OW7_169

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAG*CACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_169 not in the Motif Atlas

Homologous match to IL_8C3A_018

Geometric discrepancy: 0.5207

The information below is about IL_8C3A_018

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

7OW7|1|A|G|461
7OW7|1|A|G|462
7OW7|1|A|A|463
7OW7|1|A|G|464
*
7OW7|1|A|C|691
7OW7|1|A|A|692
7OW7|1|A|C|693
7OW7|1|A|C|694

Current chains

Chain A

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L6

Chain k

60S ribosomal protein L28