IL_7OW7_173
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- (OMG)A(A2M)AG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 7OW7|1|A|A|1650, 7OW7|1|A|G|1654
- QA status
- Modified nucleotides: OMG, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_173 not in the Motif Atlas
- Homologous match to IL_8P9A_256
- Geometric discrepancy: 0.0603
- The information below is about IL_8P9A_256
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7OW7|1|A|OMG|1522
7OW7|1|A|A|1523
7OW7|1|A|A2M|1524
7OW7|1|A|A|1525
7OW7|1|A|G|1526
*
7OW7|1|A|C|1648
7OW7|1|A|U|1649
7OW7|1|A|A|1650
7OW7|1|A|G|1651
7OW7|1|A|U|1652
7OW7|1|A|A|1653
7OW7|1|A|G|1654
7OW7|1|A|C|1655
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L4
- Chain U
- 60S ribosomal protein L27a
- Chain d
- 60S ribosomal protein L37
- Chain r
- 60S ribosomal protein L13
- Chain t
- 60S ribosomal protein L15
Coloring options: