IL_7OW7_199

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GCCGCG*CUGGC

Length

11 nucleotides

Bulged bases

7OW7|1|A|C|4741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OW7_199 not in the Motif Atlas

Homologous match to IL_8P9A_349

Geometric discrepancy: 0.3887

The information below is about IL_8P9A_349

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

7OW7|1|A|G|4737
7OW7|1|A|C|4738
7OW7|1|A|C|4739
7OW7|1|A|G|4740
7OW7|1|A|C|4741
7OW7|1|A|G|4742
*
7OW7|1|A|C|4958
7OW7|1|A|U|4959
7OW7|1|A|G|4960
7OW7|1|A|G|4961
7OW7|1|A|C|4962

Current chains

Chain A

28S rRNA

Nearby chains