IL_7P7Q_108
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7P7Q|1|A|U|2702, 7P7Q|1|A|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_108 not in the Motif Atlas
- Homologous match to IL_5J7L_348
- Geometric discrepancy: 0.0712
- The information below is about IL_5J7L_348
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
7P7Q|1|A|U|2700
7P7Q|1|A|G|2701
7P7Q|1|A|U|2702
7P7Q|1|A|A|2703
7P7Q|1|A|C|2704
*
7P7Q|1|A|G|2731
7P7Q|1|A|G|2732
7P7Q|1|A|U|2733
7P7Q|1|A|A|2734
7P7Q|1|A|G|2735
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L19
Coloring options: