IL_7P7Q_145
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGAAAGCC*GAGGG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7Q_145 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.2555
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7P7Q|1|a|U|631
7P7Q|1|a|G|632
7P7Q|1|a|A|633
7P7Q|1|a|A|634
7P7Q|1|a|A|635
7P7Q|1|a|G|636
7P7Q|1|a|C|637
7P7Q|1|a|C|638
*
7P7Q|1|a|G|654
7P7Q|1|a|A|655
7P7Q|1|a|G|656
7P7Q|1|a|G|657
7P7Q|1|a|G|658
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
- Chain i
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S16
Coloring options: